STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46830.1KEGG: kfl:Kfla_0348 hypothetical protein; SPTR: Putative uncharacterized protein. (299 aa)    
Predicted Functional Partners:
ADU49961.1
KEGG: nml:Namu_0371 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Luciferase-like monooxygenase.
  
     0.661
ADU46831.1
N-acetylmuramoyl-L-alanine amidase family 2; COGs: COG2247 Putative cell wall-binding domain; InterPro IPR002502: IPR007253: IPR006619; KEGG: mcu:HMPREF0573_11044 putative N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; cell wall binding repeat 2-containing protein; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase family 2; SPTR: LytC; PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2.
  
    0.500
ADU46832.1
KEGG: fra:Francci3_2257 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.495
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.