STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46847.1KEGG: kfl:Kfla_3734 hypothetical protein; SPTR: Putative uncharacterized protein. (239 aa)    
Predicted Functional Partners:
ADU46874.1
KEGG: xce:Xcel_3445 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.604
ADU47980.1
InterPro IPR018357: IPR001451; KEGG: cfl:Cfla_0787 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein.
  
     0.588
ADU47000.1
KEGG: nfa:nfa23340 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.571
ADU46848.1
Putative phytochrome sensor protein; COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism; InterPro IPR003018: IPR001867; KEGG: nca:Noca_2091 transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; GAF domain protein; SPTR: Transcriptional regulator; manually curated.
       0.513
ADU46846.1
Hypothetical protein.
       0.507
ADU49040.1
HesB/YadR/YfhF-family protein; InterPro IPR000361; KEGG: xce:Xcel_0286 HesB/YadR/YfhF-family protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: HesB/YadR/YfhF-family protein; PFAM: Iron-sulphur cluster biosynthesis.
  
     0.487
ADU48622.1
KEGG: ske:Sked_14030 hypothetical protein; SPTR: DNA primase.
  
     0.480
ADU50057.1
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR016048; KEGG: tbi:Tbis_2483 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase.
  
     0.441
ADU49997.1
Isoprenylcysteine carboxyl methyltransferase; COGs: COG1755 conserved hypothetical protein; InterPro IPR007269; KEGG: kfl:Kfla_2548 isoprenylcysteine carboxyl methyltransferase; PFAM: Isoprenylcysteine carboxyl methyltransferase; SPTR: Isoprenylcysteine carboxyl methyltransferase; PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family.
  
     0.408
ADU48549.1
KEGG: xce:Xcel_0944 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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