STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46850.1Protein of unknown function DUF779; COGs: COG3564 conserved hypothetical protein; InterPro IPR008497; KEGG: sen:SACE_2914 hypothetical protein; PFAM: protein of unknown function DUF779; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF779). (152 aa)    
Predicted Functional Partners:
ADU46849.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: nca:Noca_2092 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde dehydrogenase (NAD(+)); PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
    0.949
ADU46848.1
Putative phytochrome sensor protein; COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism; InterPro IPR003018: IPR001867; KEGG: nca:Noca_2091 transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; GAF domain protein; SPTR: Transcriptional regulator; manually curated.
 
     0.825
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.