STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46908.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: chl:Chy400_1183 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter. (284 aa)    
Predicted Functional Partners:
ADU46909.1
COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709; KEGG: rca:Rcas_0542 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; SPTR: ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
 
    0.953
ADU46907.1
AMP-dependent synthetase and ligase; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: chl:Chy400_1182 coenzyme F390 synthetase-like protein; PFAM: AMP-dependent synthetase and ligase; SPTR: Coenzyme F390 synthetase-like protein; PFAM: AMP-binding enzyme.
 
    0.932
ADU46910.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: chl:Chy400_1185 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
    0.929
ADU46911.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: chl:Chy400_1186 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
    0.911
ADU46912.1
AMP-dependent synthetase and ligase; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873: IPR020845; KEGG: rrs:RoseRS_0623 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
 
    0.879
ADU49631.1
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: oih:OB0684 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter permease; PFAM: Branched-chain amino acid transport system / permease component.
  
 0.837
ADU48566.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR001851: IPR003439: IPR003593: IPR017871; KEGG: gob:Gobs_1653 ABC transporter related protein; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Branched-chain amino acid transport system / permease component.
 
  
0.829
ADU49686.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: svi:Svir_22990 ABC-type branched-chain amino acid transport system, permease component; PFAM: inner-membrane translocator; SPTR: ABC-type branched-chain amino acid transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component.
    0.805
ADU49526.1
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ade:Adeh_2426 ABC branched-chain amino acid transporter, inner membrane subunit; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.
  
 0.800
ADU49661.1
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: sro:Sros_6000 branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid transport system permease protein; PFAM: Branched-chain amino acid transport system / permease component.
    0.777
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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