STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46919.1FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076: IPR003042; KEGG: sen:SACE_3335 monooxygenase, FAD-binding; PFAM: FAD dependent oxidoreductase; SPTR: Monooxygenase, FAD-binding; PFAM: FAD binding domain. (426 aa)    
Predicted Functional Partners:
ADU46920.1
OsmC family protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: ade:Adeh_2254 OsmC-like protein; PFAM: OsmC family protein; SPTR: OsmC-like protein; PFAM: OsmC-like protein.
 
     0.806
ADU48900.1
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR012255: IPR014730; KEGG: kfl:Kfla_4923 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Putative electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
  
 
 0.722
ADU46918.1
Transcriptional regulator, CadC; COGs: COG3710 DNA-binding winged-HTH domains; InterPro IPR001867: IPR000073; KEGG: msm:MSMEG_3856 transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; alpha/beta hydrolase fold; SPTR: Transcriptional regulator, CadC; PFAM: Transcriptional regulatory protein, C terminal; alpha/beta hydrolase fold.
  
    0.594
ADU48899.1
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308: IPR018206: IPR014730: IPR014731; KEGG: kse:Ksed_09610 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Putative electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.526
ADU47330.1
Cobaltochelatase CobN subunit; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672: IPR011953; KEGG: nml:Namu_0145 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: Cobaltochelatase; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
  
  
 0.513
ADU47337.1
Protoporphyrin IX magnesium-chelatase; COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR003593: IPR002035: IPR011704; KEGG: nml:Namu_0159 magnesium chelatase; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; AAA ATPase; SPTR: Magnesium chelatase; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain.
  
  
 0.494
ADU46916.1
COGs: COG2132 Putative multicopper oxidase; InterPro IPR017909: IPR011707: IPR011706: IPR002355; KEGG: sli:Slin_6866 bilirubin oxidase; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; SPTR: Bilirubin oxidase; PFAM: Multicopper oxidase.
     
 0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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