STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADU46936.1COGs: COG2345 transcriptional regulator protein; KEGG: nca:Noca_2106 transcriptional regulator; SPTR: Transcriptional regulator; PFAM: IclR helix-turn-helix domain. (271 aa)    
Predicted Functional Partners:
ADU46935.1
COGs: COG5013 Nitrate reductase alpha subunit; InterPro IPR006656: IPR006657: IPR006655: IPR006468; KEGG: nca:Noca_1346 respiratory nitrate reductase alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Respiratory nitrate reductase alpha subunit apoprotein; TIGRFAM: nitrate reductase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.821
ADU46933.1
Nitrate reductase molybdenum cofactor assembly chaperone; COGs: COG2180 Nitrate reductase delta subunit; InterPro IPR020945: IPR003765; KEGG: nca:Noca_1348 respiratory nitrate reductase chaperone NarJ; PFAM: TorD-like chaperone; SPTR: Putative nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone.
 
     0.814
ADU46932.1
COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: nca:Noca_1349 respiratory nitrate reductase gamma subunit; PFAM: Nitrate reductase gamma subunit; PRIAM: Nitrate reductase; SPTR: Respiratory nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit.
 
     0.792
ADU46934.1
COGs: COG1140 Nitrate reductase beta subunit; InterPro IPR017896: IPR006547; KEGG: kfl:Kfla_4151 nitrate reductase, beta subunit; SPTR: Nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit.
 
     0.754
ADU46682.1
COGs: COG4309 conserved hypothetical protein; KEGG: pak:HMPREF0675_3286 hypothetical protein; SPTR: Conserved protein; PFAM: Uncharacterized conserved protein (DUF2249).
 
     0.641
ADU49882.1
KEGG: nca:Noca_2102 hypothetical protein; SPTR: Conserved hypothetical membrane protein.
 
     0.597
ADU49883.1
Nitrite reductase (NO-forming); COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707: IPR001287; KEGG: nca:Noca_2101 multicopper oxidase, type 3; PFAM: multicopper oxidase type 3; PRIAM: Nitrite reductase (NO-forming); SPTR: Copper-containing nitrite reductase; PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
 
     0.584
ADU46938.1
Nitrate/nitrite transporter-like protein; COGs: COG2223 Nitrate/nitrite transporter; KEGG: saq:Sare_0190 nitrate/nitrite transporter-like protein; SPTR: Nitrate/nitrite transporter-like protein; PFAM: Major Facilitator Superfamily.
 
     0.518
ADU46903.1
Putative transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR011663; KEGG: nda:Ndas_2625 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; SPTR: Transcriptional regulator, GntR family; manually curated; PFAM: UTRA domain.
   
  
 0.511
ADU48216.1
COGs: COG2345 transcriptional regulator protein; KEGG: kse:Ksed_13330 predicted transcriptional regulator; SPTR: Putative DNA-binding protein; PFAM: HTH domain.
   
    0.493
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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