STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46957.1Peptidase M23; InterPro IPR016047; KEGG: pfr:PFREUD_17710 peptidase; PFAM: Peptidase M23; SPTR: Peptidase; PFAM: Peptidase family M23. (239 aa)    
Predicted Functional Partners:
ADU46958.1
KEGG: sna:Snas_3206 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.555
ADU47265.1
KEGG: nca:Noca_3649 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.469
ADU48278.1
KEGG: lxx:Lxx17840 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3054).
     
 0.452
ADU46956.1
Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: cwo:Cwoe_0591 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.
       0.448
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.