STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU46990.1KEGG: nml:Namu_2441 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport. (156 aa)    
Predicted Functional Partners:
ADU46989.1
Amine oxidase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937: IPR006076; KEGG: nml:Namu_3691 FAD dependent oxidoreductase; PFAM: amine oxidase; FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: Flavin containing amine oxidoreductase; FAD dependent oxidoreductase.
 
    0.923
ADU47057.1
KEGG: nml:Namu_5325 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.677
ADU46991.1
InterPro IPR012312; KEGG: nda:Ndas_5558 hemerythrin HHE cation binding domain protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Hemerythrin HHE cation binding domain protein; PFAM: Hemerythrin HHE cation binding domain.
  
    0.589
ADU46988.1
COGs: COG3569 Topoisomerase IB; InterPro IPR001631; KEGG: amd:AMED_4291 DNA topoisomerase IB; SPTR: Putative uncharacterized protein; PFAM: Eukaryotic DNA topoisomerase I, catalytic core.
 
     0.479
ADU50028.1
KEGG: art:Arth_0347 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1469).
 
     0.473
ADU47039.1
KEGG: nml:Namu_0724 protein of unknown function DUF1469; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF1469).
 
     0.430
ADU50029.1
KEGG: pfr:PFREUD_00910 hypothetical membrane protein; SPTR: Hypothetical membrane protein; PFAM: Protein of unknown function (DUF3618).
  
     0.415
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.