STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47012.1Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: amd:AMED_4111 hypothetical protein; PFAM: phospholipase D/Transphosphatidylase; SPTR: Phospholipase D; PFAM: Phospholipase D Active site motif. (498 aa)    
Predicted Functional Partners:
ADU47011.1
Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549; KEGG: cmi:CMM_0741 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Putative integral membrane protein; PFAM: Domain of unknown function DUF20.
       0.720
ADU47108.1
Peptidase M28; COGs: COG3227 Zinc metalloprotease (elastase); InterPro IPR011096: IPR013856: IPR001570: IPR007484; KEGG: sro:Sros_3786 zinc metalloprotease (elastase)-like protein; PFAM: peptidase M28; peptidase M4 thermolysin; Propeptide peptidase M4 and M36; Peptidase M4 thermolysin; SPTR: Zinc metalloprotease (Elastase)-like protein; manually curated; PFAM: Fungalysin/Thermolysin Propeptide Motif; Thermolysin metallopeptidase, alpha-helical domain; Peptidase family M28; Peptidase propeptide and YPEB domain; Thermolysin metallopeptidase, catalytic domain.
    
 0.595
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
  
  0.568
ADU47981.1
Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR017039: IPR004664; KEGG: rop:ROP_32170 putative ribonuclease; PFAM: ribonuclease BN; SPTR: Putative ribonuclease; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
 
    0.491
ADU47446.1
Hypothetical protein; InterPro IPR018114; KEGG: sro:Sros_2627 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.468
ADU48221.1
SUF system FeS assembly protein, NifU family; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871: IPR011341; KEGG: srt:Srot_2325 NifU family SUF system FeS assembly protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family.
   
 
 0.446
ADU50028.1
KEGG: art:Arth_0347 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1469).
  
     0.416
ADU47013.1
KEGG: nca:Noca_2801 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.413
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.