STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47030.1UspA domain-containing protein; InterPro IPR006016: IPR006015; KEGG: aau:AAur_0701 universal stress family domain-containing protein; PFAM: UspA domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Universal stress protein family. (130 aa)    
Predicted Functional Partners:
ADU47032.1
KEGG: mjl:Mjls_3247 integral membrane protein; SPTR: Putative integral membrane protein; PFAM: Tripartite tricarboxylate transporter TctB family.
 
     0.861
ADU47031.1
Protein of unknown function DUF112 transmembrane; COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: ach:Achl_0594 protein of unknown function DUF112 transmembrane; PFAM: protein of unknown function DUF112 transmembrane; SPTR: Putative integral membrane protein; PFAM: Tripartite tricarboxylate transporter TctA family.
 
     0.844
ADU47033.1
COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: art:Arth_1395 hypothetical protein; SPTR: Putative secreted protein; PFAM: Tripartite tricarboxylate transporter family receptor.
 
     0.843
ADU47035.1
Response regulator receiver and unknown domain protein; COGs: COG4565 Response regulator of citrate/malate metabolism; InterPro IPR001789; KEGG: sco:SCO1136 two component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative two component system response regulator; PFAM: IclR helix-turn-helix domain; Response regulator receiver domain.
       0.597
ADU47034.1
COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR005467: IPR013767: IPR003594: IPR004358; KEGG: sco:SCO1137 two component system histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Putative two component system histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.565
ADU49531.1
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: tpr:Tpau_0926 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: Amidohydrolase 2; PFAM: Amidohydrolase.
  
     0.416
ADU49943.1
RelA/SpoT domain protein; COGs: COG2357 conserved hypothetical protein; InterPro IPR007685; KEGG: nca:Noca_4620 RelA/SpoT domain-containing protein; PFAM: RelA/SpoT domain protein; SPTR: RelA/SpoT domain protein; PFAM: Region found in RelA / SpoT proteins.
  
    0.410
ADU47291.1
KEGG: gob:Gobs_0955 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.402
ADU48456.1
CoA-binding domain protein; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR000182: IPR003781; KEGG: kra:Krad_1548 CoA-binding domain protein; PFAM: CoA-binding domain protein; GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: CoA binding domain; Acetyltransferase (GNAT) family.
 
  
 0.402
ADU48703.1
InterPro IPR008407; KEGG: kra:Krad_0205 branched-chain amino acid transport; PFAM: branched-chain amino acid transport; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport protein (AzlD).
  
     0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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