STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47059.1Protein of unknown function DUF306 Meta and HslJ; COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: rer:RER_23460 hypothetical protein; PFAM: protein of unknown function DUF306 Meta and HslJ; SPTR: Putative uncharacterized protein; PFAM: META domain. (145 aa)    
Predicted Functional Partners:
ADU49393.1
ATP-binding region ATPase domain protein; InterPro IPR003018: IPR003594: IPR018247; KEGG: cai:Caci_4163 putative PAS/PAC sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SPTR: PAS/PAC sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.752
ADU47058.1
Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: ami:Amir_4979 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain.
       0.584
ADU47976.1
Transcriptional regulator, LuxR family; COGs: COG3899 ATPase; InterPro IPR000792: IPR019734; KEGG: sti:Sthe_2247 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; Tetratricopeptide repeat; SPTR: Transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.
  
    0.538
ADU47060.1
HNH nuclease; InterPro IPR003615; KEGG: kse:Ksed_09510 HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222.
       0.527
ADU49878.1
Polyketide cyclase/dehydrase; InterPro IPR019587; KEGG: aau:AAur_3688 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.415
ADU48661.1
InterPro IPR013096; KEGG: kfl:Kfla_5681 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain.
  
     0.411
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.