STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47063.1Hypothetical protein; InterPro IPR019825; KEGG: bcv:Bcav_0618 hypothetical protein; SPTR: Putative uncharacterized protein. (337 aa)    
Predicted Functional Partners:
ADU47065.1
Type II secretion system F domain; InterPro IPR018076; KEGG: kse:Ksed_25290 Flp pilus assembly protein TadB; PFAM: Type II secretion system F domain; SPTR: Flp pilus assembly protein TadB.
 
     0.833
ADU47066.1
Type II secretion system F domain; InterPro IPR018076; KEGG: kse:Ksed_25280 Flp pilus assembly protein TadC; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
 
     0.832
ADU47064.1
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482: IPR017975; KEGG: kse:Ksed_25300 Flp pilus assembly protein, ATPase CpaF; PFAM: type II secretion system protein E; SPTR: Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein; TIGRFAM: helicase/secretion neighborhood ATPase.
       0.791
ADU47067.1
KEGG: jde:Jden_2222 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
     0.685
ADU47456.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362: IPR017475: IPR017871; KEGG: bfa:Bfae_02670 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate galactos [...]
  
  
 0.685
ADU47069.1
KEGG: mab:MAB_0475 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: helicase/secretion neighborhood TadE-like protein.
 
     0.630
ADU50040.1
CHAP domain containing protein; COGs: COG3942 Surface antigen; InterPro IPR007921; KEGG: ooe:OEOE_1430 cell wall hydrolase; PFAM: CHAP domain containing protein; SPTR: Cell wall-associated hydrolase with LysM domains; PFAM: CHAP domain.
  
     0.589
ADU47777.1
Hypothetical protein; KEGG: tmt:Tmath_0720 capsule polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Capsule polysaccharide biosynthesis protein.
  
     0.560
ADU47068.1
KEGG: ske:Sked_33320 hypothetical protein; SPTR: Membrane protein.
       0.557
ADU49088.1
KEGG: scb:SCAB_33261 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.535
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.