STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47064.1Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482: IPR017975; KEGG: kse:Ksed_25300 Flp pilus assembly protein, ATPase CpaF; PFAM: type II secretion system protein E; SPTR: Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein; TIGRFAM: helicase/secretion neighborhood ATPase. (393 aa)    
Predicted Functional Partners:
ADU47065.1
Type II secretion system F domain; InterPro IPR018076; KEGG: kse:Ksed_25290 Flp pilus assembly protein TadB; PFAM: Type II secretion system F domain; SPTR: Flp pilus assembly protein TadB.
  
  
 0.904
ADU47052.1
Type II secretion system F domain; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: tcu:Tcur_1850 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Probable secretion system protein TadC; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.900
ADU47066.1
Type II secretion system F domain; InterPro IPR018076; KEGG: kse:Ksed_25280 Flp pilus assembly protein TadC; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.890
ADU47051.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR002035: IPR018076; KEGG: tcu:Tcur_1851 type II secretion system protein; PFAM: Type II secretion system F domain; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative membrane protein; PFAM: von Willebrand factor type A domain; Bacterial type II secretion system protein F domain.
 
  
 0.879
ADU47806.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: kse:Ksed_10340 Flp pilus assembly protein TadB; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.827
ADU47063.1
Hypothetical protein; InterPro IPR019825; KEGG: bcv:Bcav_0618 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.792
ADU47067.1
KEGG: jde:Jden_2222 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
     
 0.705
ADU47049.1
Cobyrinic acid a,c-diamide synthase; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: ace:Acel_0975 cobyrinic acid a,c-diamide synthase; SPTR: Probable chromosome partitioning ATPase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
  
 0.639
ADU47069.1
KEGG: mab:MAB_0475 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: helicase/secretion neighborhood TadE-like protein.
     
 0.550
ADU47805.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: xce:Xcel_1032 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.550
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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