STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47075.1Hypothetical protein; KEGG: bfa:Bfae_28470 DNA polymerase III, subunit gamma/tau; SPTR: DNA polymerase III, subunit gamma/tau. (162 aa)    
Predicted Functional Partners:
ADU47076.1
Peptidase S8 and S53 subtilisin kexin sedolisin; InterPro IPR010259: IPR000209: IPR003137: IPR007280; KEGG: kfl:Kfla_2384 protease-associated PA domain protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; protease-associated PA domain protein; peptidase domain protein; SPTR: Protease-associated PA domain protein; PFAM: PA domain; Peptidase inhibitor I9; Subtilase family.
       0.737
ADU47074.1
COGs: COG1613 ABC-type sulfate transport system periplasmic component; InterPro IPR006059: IPR005669; KEGG: rop:ROP_09930 sulfate ABC transporter sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Sulfate ABC transporter sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein.
       0.461
ADU47077.1
DEAD/DEAH box helicase domain protein; COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterPro IPR014021: IPR001650: IPR011545: IPR014001; KEGG: nca:Noca_0370 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Putative ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
       0.443
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.