STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47100.1Sterol-binding domain protein; InterPro IPR003033; KEGG: saq:Sare_0143 sterol-binding domain-containing protein; PFAM: Sterol-binding domain protein; SPTR: Sterol-binding domain-containing protein; PFAM: SCP-2 sterol transfer family. (155 aa)    
Predicted Functional Partners:
ADU46593.1
KEGG: ami:Amir_0885 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
ADU46592.1
KEGG: sen:SACE_1595 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
ADU47954.1
InterPro IPR010427; KEGG: bcv:Bcav_3284 protein of unknown function DUF1023; PFAM: protein of unknown function DUF1023; SPTR: Putative uncharacterized protein; PFAM: Alpha/beta hydrolase of unknown function (DUF1023).
  
     0.550
ADU49088.1
KEGG: scb:SCAB_33261 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.540
ADU47933.1
InterPro IPR011600; KEGG: npu:Npun_R3338 peptidase C14, caspase catalytic subunit P20; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: Putative uncharacterized protein; PFAM: Caspase domain.
  
     0.530
ADU47099.1
LmbE family protein; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: kse:Ksed_25150 uncharacterized LmbE-like protein; PFAM: LmbE family protein; SPTR: Uncharacterized LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
       0.513
ADU50045.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: sma:SAV_5596 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
  
     0.513
ADU48962.1
DALR anticodon binding domain protein; InterPro IPR008909; KEGG: mmi:MMAR_4105 arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain protein; SPTR: Arginyl tRNA synthetase; PFAM: DALR anticodon binding domain.
  
     0.449
ADU48401.1
3-ketoacyl-CoA thiolase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR020616: IPR020617: IPR002155; KEGG: cwo:Cwoe_0195 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
   0.443
ADU47934.1
Hypothetical protein; KEGG: gob:Gobs_2142 40-residue YVTN family beta-propeller repeat protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083).
  
     0.440
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.