STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Experiments
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[Homology]
Score
ADU47106.1Dimethylargininase; COGs: COG1834 N-Dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: kfl:Kfla_3423 dimethylargininase; PFAM: amidinotransferase; PRIAM: Dimethylargininase; SPTR: Dimethylarginine dimethylaminohydrolase; PFAM: Amidinotransferase. (256 aa)    
Predicted Functional Partners:
ADU47107.1
Transcriptional regulator, LysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: sro:Sros_3515 LysR family regulatory protein; PFAM: regulatory protein LysR; LysR substrate-binding; SPTR: LysR family regulatory protein; manually curated; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family.
  
    0.727
ADU47744.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR000815; KEGG: nca:Noca_3517 flavoprotein disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
    
 
 0.553
ADU47108.1
Peptidase M28; COGs: COG3227 Zinc metalloprotease (elastase); InterPro IPR011096: IPR013856: IPR001570: IPR007484; KEGG: sro:Sros_3786 zinc metalloprotease (elastase)-like protein; PFAM: peptidase M28; peptidase M4 thermolysin; Propeptide peptidase M4 and M36; Peptidase M4 thermolysin; SPTR: Zinc metalloprotease (Elastase)-like protein; manually curated; PFAM: Fungalysin/Thermolysin Propeptide Motif; Thermolysin metallopeptidase, alpha-helical domain; Peptidase family M28; Peptidase propeptide and YPEB domain; Thermolysin metallopeptidase, catalytic domain.
       0.521
ADU47105.1
Hypothetical protein.
       0.505
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.494
ADU46700.1
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887: IPR019888: IPR000485; KEGG: nca:Noca_1625 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: AsnC family.
     
 0.490
ADU49932.1
COGs: COG0648 Endonuclease IV; InterPro IPR012307: IPR001719: IPR018246; KEGG: nca:Noca_4666 endonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2; SPTR: Endonuclease IV; manually curated; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1).
     
 0.485
ADU47717.1
Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR004664: IPR019825; KEGG: kra:Krad_3967 ribonuclease BN; PFAM: ribonuclease BN; SPTR: Membrane protein ribonuclease BN-like family protein; PFAM: Ribonuclease BN-like family; TIGRFAM: ribonuclease, putative.
  
    0.475
ADU47316.1
Putative F420-dependent enzyme; InterPro IPR011576: IPR019920; KEGG: nca:Noca_0878 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding; TIGRFAM: putative F420-dependent enzyme; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme.
  
    0.468
ADU48411.1
Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: kfl:Kfla_3332 ribonuclease BN; PFAM: ribonuclease BN; SPTR: Putative integral membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
  
    0.457
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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