STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47118.1Tripeptidyl-peptidase B; InterPro IPR000073: IPR013595; KEGG: kse:Ksed_24850 alpha/beta hydrolase family protein; PFAM: TAP domain protein; alpha/beta hydrolase fold; SPTR: Proteinase (Putative secreted protein); PFAM: TAP-like protein. (491 aa)    
Predicted Functional Partners:
ADU47120.1
TAP domain protein; InterPro IPR000073: IPR013595; KEGG: sro:Sros_9211 hypothetical protein; PFAM: TAP domain protein; alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein; PFAM: TAP-like protein; alpha/beta hydrolase fold.
 
    
0.812
ADU47119.1
TAP domain protein; InterPro IPR000073: IPR013595; KEGG: kse:Ksed_24850 alpha/beta hydrolase family protein; PFAM: TAP domain protein; alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase family protein; PFAM: TAP-like protein.
 
    
0.797
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.638
ADU47116.1
COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593; KEGG: kse:Ksed_24860 DNA polymerase III, gamma/tau subunit; SMART: AAA ATPase; SPTR: ATPase; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit.
       0.634
ADU48580.1
KEGG: aau:AAur_2439 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3145).
  
     0.552
ADU50079.1
Hypothetical protein; InterPro IPR018201; KEGG: kfl:Kfla_0729 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Pregnancy-associated plasma protein-A.
  
     0.421
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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