STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47133.1COGs: COG1741 Pirin-related protein; InterPro IPR003829: IPR008778: IPR012093; KEGG: sna:Snas_2745 pirin domain-containing protein; PFAM: Pirin domain protein; SPTR: Pirin domain protein; PFAM: Pirin C-terminal cupin domain; Pirin; Belongs to the pirin family. (328 aa)    
Predicted Functional Partners:
ADU47132.1
Putative F420-dependent oxidoreductase; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR016048: IPR019952; KEGG: rha:RHA1_ro04019 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: Putative uncharacterized protein; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family.
  
  
 0.821
ADU47134.1
Hypothetical protein; COGs: COG2388 acetyltransferase; KEGG: sco:SCO7730 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.728
ADU47097.1
Extradiol ring-cleavage dioxygenase class III protein subunit B; COGs: COG3384 conserved hypothetical protein; InterPro IPR004183: IPR014436; KEGG: art:Arth_0218 extradiol ring-cleavage dioxygenase III subunit B; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; SPTR: Putative uncharacterized protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
 0.641
ADU47135.1
Protein of unknown function DUF202; COGs: COG2149 membrane protein; InterPro IPR003807; KEGG: kra:Krad_3719 protein of unknown function DUF202; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF.
       0.547
ADU47136.1
Protein of unknown function DUF202; InterPro IPR003807: IPR020264; KEGG: sen:SACE_6376 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF.
       0.547
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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