STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47167.1Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: fre:Franean1_6143 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel. (268 aa)    
Predicted Functional Partners:
ADU47166.1
COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: tcu:Tcur_2012 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Putative DNA-binding protein; PFAM: Ppx/GppA phosphatase family.
       0.723
ADU49187.1
Hypothetical protein; COGs: COG1946 Acyl-CoA thioesterase; KEGG: sgr:SGR_2035 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.666
ADU46739.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: cfl:Cfla_0574 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
  
  
 0.615
ADU47775.1
Oxidoreductase domain-containing protein; COGs: COG0673 dehydrogenase and related protein; KEGG: net:Neut_1547 oxidoreductase domain-containing protein; SPTR: Oxidoreductase domain protein.
  
  
 0.615
ADU48532.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: ske:Sked_15440 predicted dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Putative oxidoreductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
  
  
 0.615
ADU47165.1
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR000412: IPR013525; KEGG: nca:Noca_0479 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Putative ABC transporter permease protein; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
       0.608
ADU47164.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: kse:Ksed_22040 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
       0.540
ADU48504.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611: IPR002173; KEGG: tbi:Tbis_1286 PfkB domain-containing protein; PFAM: PfkB domain protein; SPTR: Putative carbohydrate kinase; PFAM: pfkB family carbohydrate kinase.
 
  
 0.510
ADU47430.1
Abortive infection protein; InterPro IPR003675; KEGG: pac:PPA0317 putative protease; PFAM: Abortive infection protein; SPTR: Conserved protein, putative protease; PFAM: CAAX amino terminal protease family.
 
     0.501
ADU47173.1
KEGG: bcv:Bcav_0722 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lsr2.
  
     0.460
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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