STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47182.1KEGG: nml:Namu_3541 hypothetical protein; SPTR: Putative uncharacterized protein. (266 aa)    
Predicted Functional Partners:
ADU49079.1
KEGG: rha:RHA1_ro05202 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.568
ADU49935.1
HNH nuclease; InterPro IPR003615; KEGG: rop:ROP_20630 hypothetical protein; SMART: HNH nuclease; SPTR: Putative uncharacterized protein.
  
     0.514
ADU48157.1
Glutamate synthase (NADH) large subunit; COGs: COG0069 Glutamate synthase domain 2; InterProIPR017932: IPR000583: IPR006982: IPR002932: IPR 002489; KEGG: kfl:Kfla_3074 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Putative glutamate synthase (NADPH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
   
    0.499
ADU47950.1
KEGG: msm:MSMEG_1644 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.491
ADU49049.1
COGs: COG5282 conserved hypothetical protein; InterPro IPR018766; KEGG: kse:Ksed_19090 hypothetical protein; PFAM: Protein of unknown function DUF2342; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase.
  
     0.488
ADU46668.1
HNH nuclease; InterPro IPR003615; KEGG: art:Arth_1274 HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease.
  
     0.483
ADU47060.1
HNH nuclease; InterPro IPR003615; KEGG: kse:Ksed_09510 HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; PFAM: HNH endonuclease; Domain of unknown function DUF222.
  
     0.429
ADU46631.1
COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: bfa:Bfae_03240 chromosome partitioning ATPase; SPTR: ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
     0.428
ADU47608.1
KEGG: tbi:Tbis_2233 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2877).
  
     0.424
ADU49024.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: rsa:RSal33209_3016 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
  
     0.413
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.