STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47199.1KEGG: kfl:Kfla_5632 hypothetical protein; SPTR: Putative uncharacterized protein. (169 aa)    
Predicted Functional Partners:
ADU47874.1
KEGG: art:Arth_3707 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.554
ADU48912.1
InterPro IPR000209; KEGG: kfl:Kfla_5233 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative subtilisin-like protease; PFAM: Subtilase family; Belongs to the peptidase S8 family.
  
     0.540
ADU50015.1
KEGG: nca:Noca_3724 putative phosphodiesterase; SPTR: Putative phosphodiesterase.
 
     0.538
ADU47198.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR007630: IPR014284; KEGG: sma:SAV_4735 ECF subfamily RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02952 family.
       0.517
ADU47057.1
KEGG: nml:Namu_5325 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.476
ADU50027.1
KEGG: aau:AAur_0122 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.474
ADU46751.1
KEGG: ami:Amir_2064 superoxide dismutase; SPTR: Superoxide dismutase; manually curated.
  
     0.457
ADU46984.1
KEGG: sro:Sros_2455 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.454
ADU47200.1
KEGG: kra:Krad_0034 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.442
ADU47201.1
Glutaredoxin 2; InterPro IPR008554; KEGG: nca:Noca_0492 glutaredoxin 2; PFAM: glutaredoxin 2; SPTR: Glutaredoxin 2; PFAM: Glutaredoxin-like domain (DUF836).
       0.442
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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