STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47218.1InterPro IPR011701; KEGG: kfl:Kfla_5920 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Putative integral membrane protein; PFAM: Major Facilitator Superfamily. (510 aa)    
Predicted Functional Partners:
ADU49270.1
KEGG: kfl:Kfla_6144 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.643
ADU49271.1
KEGG: sma:SAV_5893 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.595
ADU50095.1
Transcriptional regulator, PadR family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: ace:Acel_2137 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: Transcriptional regulator, PadR family; PFAM: Transcriptional regulator PadR-like family.
  
     0.585
ADU47219.1
RNA polymerase, sigma subunit, ECF family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: cfl:Cfla_0652 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
    0.546
ADU47220.1
Hypothetical protein; InterPro IPR019825; KEGG: xce:Xcel_2744 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.540
ADU47504.1
InterPro IPR001343: IPR018511: IPR003995; KEGG: kfl:Kfla_0735 RTX toxins and related Ca2+-binding protein-like protein; SPTR: RTX toxins and related Ca2+-binding protein-like protein.
  
     0.501
ADU46647.1
Aminoglycoside phosphotransferase; COGs: COG0510 choline kinase involved in LPS biosynthesis; InterPro IPR002575; KEGG: scb:SCAB_38761 putative phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Putative phosphotransferase; PFAM: Phosphotransferase enzyme family.
 
    0.459
ADU49110.1
KEGG: kfl:Kfla_1437 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.429
ADU47282.1
KEGG: ske:Sked_31380 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3027).
 
     0.426
ADU49272.1
Virulence factor Mce family protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399: IPR005693; KEGG: sma:SAV_5894 mce-related protein; PFAM: Mammalian cell entry related domain protein; SPTR: Putative mce-related protein; TIGRFAM: virulence factor Mce family protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
  
     0.423
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.