STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47309.1KEGG: ske:Sked_28360 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (148 aa)    
Predicted Functional Partners:
ADU47308.1
Hypothetical protein; InterPro IPR017871; KEGG: cfl:Cfla_2448 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.588
ADU50082.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ach:Achl_0399 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Putative solute binding lipoprotein; PFAM: Bacterial extracellular solute-binding protein.
  
     0.542
ADU47980.1
InterPro IPR018357: IPR001451; KEGG: cfl:Cfla_0787 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein.
  
     0.522
ADU47307.1
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006121: IPR001757: IPR008250: IPR005834: IPR 006403: IPR006416: IPR018303; KEGG: rha:RHA1_ro11210 copper-exporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Putative cation-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated doma [...]
       0.507
ADU49816.1
Domain of unknown function DUF1918; InterPro IPR015057: IPR015035; KEGG: xce:Xcel_0903 hypothetical protein; PFAM: Domain of unknown function DUF1918; Domain of unknown function DUF1876; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1876); Domain of unknown function (DUF1918).
  
     0.424
ADU49812.1
Domain of unknown function DUF1918; InterPro IPR015035; KEGG: cai:Caci_1558 hypothetical protein; PFAM: Domain of unknown function DUF1918; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1918).
  
     0.408
ADU50116.1
Hypothetical protein; InterPro IPR004378; KEGG: bcv:Bcav_0930 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein.
  
     0.408
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.