STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47318.1Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR016048; KEGG: sco:SCO3951 hypothetical protein; PFAM: Luciferase-like, subgroup; SPTR: Luciferase protein; PFAM: Luciferase-like monooxygenase. (294 aa)    
Predicted Functional Partners:
ADU49026.1
LPPG:FO 2-phospho-L-lactate transferase; COGs: COG0391 conserved hypothetical protein; InterPro IPR010115: IPR002882; KEGG: kra:Krad_3851 LPPG:FO 2-phospho-L-lactate transferase; PFAM: protein of unknown function UPF0052 and CofD; SPTR: LPPG:Fo 2-phospho-L-lactate transferase; TIGRFAM: LPPG domain protein containing protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.785
ADU49027.1
F420-dependent oxidoreductase; COGs: COG1478 conserved hypothetical protein; InterPro IPR008225: IPR002847; KEGG: kra:Krad_3852 F420-dependent oxidoreductase, putative; PFAM: protein of unknown function DUF129; SPTR: Putative uncharacterized protein; TIGRFAM: F420-dependent oxidoreductase; PFAM: F420-0:Gamma-glutamyl ligase; TIGRFAM: F420-0:gamma-glutamyl ligase.
 
   
 0.773
ADU47800.1
Hypothetical protein; InterPro IPR004378; KEGG: mav:MAV_0120 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein.
  
   
 0.766
ADU48836.1
2-phospho-L-lactate guanylyltransferase CofC; COGs: COG1920 conserved hypothetical protein; InterPro IPR002835; KEGG: tbi:Tbis_2795 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: 2-phospho-L-lactate guanylyltransferase CofC; PFAM: Uncharacterized protein conserved in bacteria (DUF2064); TIGRFAM: 2-phospho-L-lactate guanylyltransferase CofC.
 
   
 0.583
ADU47003.1
F420-dependent oxidoreductase, G6PDH family; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019945; KEGG: mgi:Mflv_3722 putative dehydrogenase protein; SPTR: Putative dehydrogenase protein; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, G6PDH family.
  
     0.553
ADU47319.1
KEGG: lch:Lcho_0715 hypothetical protein; SPTR: Putative integron gene cassette protein.
       0.501
ADU47620.1
Hypothetical protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR001969; KEGG: dsh:Dshi_2543 putative binding protein; SPTR: ABC transporter, periplasmic binding protein; PFAM: NMT1/THI5 like.
 
  
 0.498
ADU47484.1
Putative F420-dependent enzyme; InterPro IPR019965; KEGG: rop:ROP_15660 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative F420-dependent enzyme; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv2061 family.
  
     0.446
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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