STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47385.1Addiction module toxin, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: kse:Ksed_01340 toxin-antitoxin system, toxin component, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; SPTR: Toxin-antitoxin system, toxin component, Txe/YoeB family; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family. (85 aa)    
Predicted Functional Partners:
ADU47386.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 0.999
ADU49472.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 0.782
ADU48586.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.748
ADU49978.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.748
ADU48112.1
KEGG: mkm:Mkms_2155 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NADPH-dependent FMN reductase.
 
      0.627
ADU46900.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.468
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.