STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47386.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (85 aa)    
Predicted Functional Partners:
ADU47385.1
Addiction module toxin, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: kse:Ksed_01340 toxin-antitoxin system, toxin component, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; SPTR: Toxin-antitoxin system, toxin component, Txe/YoeB family; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family.
 
 
 0.999
ADU48585.1
Plasmid stabilization system; InterPro IPR007712; KEGG: rop:ROP_29420 hypothetical protein; PFAM: plasmid stabilization system; SPTR: Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein.
   
 
 0.514
ADU49977.1
Plasmid stabilization system; COGs: COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; InterPro IPR007712; KEGG: rop:ROP_29420 hypothetical protein; PFAM: plasmid stabilization system; SPTR: Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein.
   
 
 0.514
ADU49471.1
Addiction module toxin, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR007712: IPR012753: IPR009614; KEGG: aeh:Mlg_1786 addiction module antitoxin; PFAM: plasmid stabilization system; SPTR: Possible addiction module toxin; TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: addiction module toxin, RelE/StbE family; toxin-antitoxin system, toxin component, Txe/YoeB family.
  
 
 0.470
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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