STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47391.1IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593: IPR002611; KEGG: rha:RHA1_ro06914 insertion sequence ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; SPTR: Probable insertion sequence ATP-binding protein; PFAM: IstB-like ATP binding protein. (278 aa)    
Predicted Functional Partners:
ADU47390.1
Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_2820 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Putative transposase; PFAM: Integrase core domain.
 
  
 0.957
ADU47658.1
Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_2820 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Putative transposase; PFAM: Integrase core domain.
 
  
 0.817
ADU49605.1
Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: rop:ROP_pROB02-00790 putative transposase orfA for insertion sequence element; PFAM: Integrase catalytic region; SPTR: Putative transposase orfA for insertion sequence element; PFAM: Integrase core domain.
 
  
 0.816
ADU47405.1
RNA-directed DNA polymerase; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477: IPR013597; KEGG: rha:RHA1_ro10191 RNA-directed DNA polymerase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; PRIAM: RNA-directed DNA polymerase; SPTR: RNA-directed DNA polymerase; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
  
     0.685
ADU50076.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.630
ADU48756.1
DnaB domain protein helicase domain protein; COGs: COG0305 Replicative DNA helicase; InterPro IPR007694; KEGG: ttr:Tter_1028 DnaB domain protein helicase domain protein; PFAM: DnaB domain protein helicase domain protein; SPTR: DnaB domain protein helicase domain protein; PFAM: DnaB-like helicase C terminal domain.
  
 
 0.617
ADU47566.1
Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: msm:MSMEG_5398 ISMsm4, transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: ISMsm4, transposase; PFAM: Transposase.
 
     0.579
ADU47665.1
Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: msm:MSMEG_5398 ISMsm4, transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: ISMsm4, transposase; PFAM: Transposase.
 
     0.579
ADU49598.1
InterPro IPR003346; KEGG: mva:Mvan_4882 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase IS116/IS110/IS902 family protein; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.512
ADU47328.1
InterPro IPR003346; KEGG: mva:Mvan_4882 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase IS116/IS110/IS902 family protein; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.489
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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