STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47410.1KEGG: sna:Snas_3081 hypothetical protein; SPTR: Putative uncharacterized protein. (137 aa)    
Predicted Functional Partners:
ADU47523.1
KEGG: kra:Krad_1108 secreted protein; SPTR: Secreted protein.
   
 
 0.636
ADU47409.1
DNA helicase; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: bcv:Bcav_0899 DNA helicase; SPTR: Putative uncharacterized protein.
 
     0.604
ADU49832.1
Metallophosphoesterase; InterPro IPR004843; KEGG: bfa:Bfae_11330 predicted phosphohydrolase; PFAM: metallophosphoesterase; SPTR: Putative integral membrane protein; PFAM: Calcineurin-like phosphoesterase.
  
     0.601
ADU48027.1
KEGG: cai:Caci_1654 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.597
ADU47950.1
KEGG: msm:MSMEG_1644 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.575
ADU48092.1
InterPro IPR000182; KEGG: kse:Ksed_12430 acetyltransferase (GNAT) family protein; SPTR: Putative uncharacterized protein; PFAM: FR47-like protein.
  
     0.570
ADU47289.1
Secreted protein; COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: nca:Noca_0498 secreted protein; SPTR: Putative secreted protein.
  
     0.565
ADU47214.1
KEGG: kra:Krad_0632 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.559
ADU49093.1
KEGG: tcu:Tcur_1191 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.553
ADU46643.1
Hypothetical protein; COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: sgr:SGR_1028 hypothetical protein; SPTR: Lytic transglycosylase catalytic.
  
     0.491
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.