STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47450.1InterPro IPR000620; KEGG: nml:Namu_5292 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family. (354 aa)    
Predicted Functional Partners:
ADU47449.1
InterPro IPR010852; KEGG: nml:Namu_5293 protein of unknown function DUF1470; PFAM: protein of unknown function DUF1470; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1470); CGNR zinc finger.
 
   
 0.906
ADU48690.1
Endonuclease/exonuclease/phosphatase; COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: sen:SACE_0425 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family.
  
     0.433
ADU46668.1
HNH nuclease; InterPro IPR003615; KEGG: art:Arth_1274 HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease.
  
     0.407
ADU48703.1
InterPro IPR008407; KEGG: kra:Krad_0205 branched-chain amino acid transport; PFAM: branched-chain amino acid transport; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport protein (AzlD).
  
     0.407
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.