STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47494.1Glycosyl hydrolase family 32 domain protein; COGs: COG1621 Beta-fructosidase (levanase/invertase); InterPro IPR013148; KEGG: fre:Franean1_7054 glycosyl hydrolase family 32 protein; PFAM: Glycosyl hydrolase family 32 domain protein; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolases family 32 N-terminal domain. (368 aa)    
Predicted Functional Partners:
ADU49743.1
PTS system D-fructose-specific IIABC components (F1P-forming), Frc family; COGs: COG1299 Phosphotransferase system fructose-specific IIC component; InterProIPR002178: IPR013011: IPR013014: IPR004715: IPR 003353: IPR006327: IPR003352; KEGG: sco:SCO3196 fructose-specific permease; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; SPTR: Fructose-specific permease; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: Phosphotransferase s [...]
   
  
 0.626
ADU48756.1
DnaB domain protein helicase domain protein; COGs: COG0305 Replicative DNA helicase; InterPro IPR007694; KEGG: ttr:Tter_1028 DnaB domain protein helicase domain protein; PFAM: DnaB domain protein helicase domain protein; SPTR: DnaB domain protein helicase domain protein; PFAM: DnaB-like helicase C terminal domain.
  
   
 0.598
ADU47495.1
Hypothetical protein; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; KEGG: xcv:XCV0349 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NmrA-like family.
       0.569
ADU46769.1
COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867: IPR000106; KEGG: sco:SCO3921 low molecular weight protein-tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase; manually curated; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
  
 
 0.462
ADU47694.1
COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867: IPR000106; KEGG: aau:AAur_3227 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Low molecular weight phosphotyrosine protein phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
  
 
 0.462
ADU48021.1
Protein-tyrosine phosphatase, low molecular weight; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: nca:Noca_4205 adenylylsulfate kinase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Ptp; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
  
 
 0.462
ADU48594.1
Protein-tyrosine phosphatase, low molecular weight; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: art:Arth_0213 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Putative arsenate reductase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
  
 
 0.462
ADU49828.1
KEGG: nml:Namu_3002 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.426
ADU46647.1
Aminoglycoside phosphotransferase; COGs: COG0510 choline kinase involved in LPS biosynthesis; InterPro IPR002575; KEGG: scb:SCAB_38761 putative phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Putative phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.425
ADU48607.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060: IPR018062; KEGG: ach:Achl_1710 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
  
 0.403
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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