STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47522.1PhoH family protein; COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714: IPR006596; KEGG: nca:Noca_1057 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; SPTR: Putative ATP-binding protein; PFAM: PhoH-like protein. (462 aa)    
Predicted Functional Partners:
ADU47902.1
COGs: COG1530 Ribonuclease G and E; InterPro IPR004659: IPR017937: IPR019307: IPR003029; KEGG: sgr:SGR_4940 hypothetical protein; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Putative uncharacterized protein; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
  
    0.577
ADU47521.1
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.560
ADU47520.1
Hly-III family protein; COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR004254; KEGG: kra:Krad_1104 Hly-III family protein; PFAM: Hly-III family protein; SPTR: Integral membrane protein; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family.
 
     0.528
ADU48627.1
TIM-barrel protein, nifR3 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269: IPR004652: IPR018517; KEGG: kse:Ksed_11870 putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; SPTR: Transcriptional regulator, NifR3/Smm1 family protein; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family.
  
  
 0.447
ADU49692.1
Protein of unknown function DUF6 transmembrane; InterPro IPR000620; KEGG: sen:SACE_7083 drug/metabolite transporter (DMT) superfamily protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Drug/metabolite transporter (DMT) superfamily protein; PFAM: EamA-like transporter family.
  
    0.401
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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