STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47571.1KEGG: rha:RHA1_ro05895 hypothetical protein; SPTR: Putative uncharacterized protein. (117 aa)    
Predicted Functional Partners:
ADU47569.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cfl:Cfla_2548 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
       0.782
ADU47570.1
NUDIX hydrolase; InterPro IPR000086: IPR020084: IPR020476; KEGG: pak:HMPREF0675_3603 hydrolase, NUDIX family; PFAM: NUDIX hydrolase; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
       0.779
ADU47572.1
KEGG: aca:ACP_2010 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.779
ADU47568.1
KEGG: pak:HMPREF0675_4975 hypothetical protein; SPTR: Hypothetical membrane protein.
       0.762
ADU47504.1
InterPro IPR001343: IPR018511: IPR003995; KEGG: kfl:Kfla_0735 RTX toxins and related Ca2+-binding protein-like protein; SPTR: RTX toxins and related Ca2+-binding protein-like protein.
  
     0.500
ADU47149.1
KEGG: ske:Sked_32050 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3180).
  
     0.443
ADU47567.1
Hypothetical protein; InterPro IPR003004; KEGG: pak:HMPREF0675_4973 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.434
ADU48831.1
KEGG: kse:Ksed_10780 hypothetical protein; SPTR: Secreted protein; PFAM: Protein of unknown function (DUF3515).
  
     0.433
ADU47574.1
KEGG: nca:Noca_4159 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF559).
  
     0.431
ADU49368.1
KEGG: nca:Noca_4159 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF559).
  
     0.429
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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