STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47583.1DSBA oxidoreductase; COGs: COG1651 Protein-disulfide isomerase; InterPro IPR001853: IPR017936; KEGG: sen:SACE_0617 DsbA-like thioredoxin domain-containing protein; PFAM: DSBA oxidoreductase; SPTR: DSBA oxidoreductase; PFAM: DSBA-like thioredoxin domain. (255 aa)    
Predicted Functional Partners:
ADU47582.1
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: sco:SCO5994 integral membrane cytochrome biogenesis protein; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Putative integral membrane cytochrome biogenesis protein; PFAM: Cytochrome C biogenesis protein transmembrane region.
 
   
 0.924
ADU49414.1
Vitamin K epoxide reductase; COGs: COG4243 membrane protein; InterPro IPR012932; KEGG: afo:Afer_0226 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; SPTR: Vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase family.
  
  
 0.642
ADU47210.1
Redoxin domain protein; InterPro IPR017909: IPR017936: IPR013740; KEGG: kse:Ksed_24350 thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin domain protein; SPTR: Putative uncharacterized protein; PFAM: Redoxin.
  
 
 0.617
ADU47584.1
Transcriptional regulator, ArsR family; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001845: IPR001763: IPR001307; KEGG: sen:SACE_4409 ArsR family transcriptional regulator; PFAM: Rhodanese domain protein; regulatory protein ArsR; SMART: Rhodanese domain protein; regulatory protein ArsR; SPTR: Possible transcriptional regulatory protein (Possibly ArsR-family); PFAM: Bacterial regulatory protein, arsR family; Rhodanese-like domain.
  
  
 0.555
ADU49484.1
Copper-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR011017: IPR001757: IPR000695: IPR008250: IPR 005834: IPR007029: IPR006403: IPR006416: IPR018303; KEGG: nca:Noca_2922 copper-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; YHS domain-containing protein; SMART: TRASH domain-containing protein; SPTR: Copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC [...]
 
 
 
 0.458
ADU47797.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bfa:Bfae_20890 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase; manually curated; PFAM: Glycosyl transferase family 2.
 
   
 0.418
ADU49479.1
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: cfl:Cfla_0355 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region.
 
   
 0.416
ADU49556.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896: IPR011895: IPR002880: IPR019752: IPR 019456: IPR011766: IPR017900; KEGG: mmi:MMAR_3408 pyruvate ferredoxin/flavodoxin oxidoreductase family protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; TIGRFAM [...]
       0.412
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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