STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47594.1MmpL domain-containing protein; COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731; KEGG: nca:Noca_0114 MmpL domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: MMPL family; TIGRFAM: Transport protein. (688 aa)    
Predicted Functional Partners:
ADU47595.1
Regulatory protein MarR; InterPro IPR000835; KEGG: nca:Noca_0115 regulatory protein, MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Putative uncharacterized protein; PFAM: MarR family.
 
  
 0.638
ADU47593.1
Hypothetical protein; KEGG: ach:Achl_1570 cell division protein FtsW; SPTR: Amino acid permease-associated region.
       0.491
ADU48012.1
Hypothetical protein; InterPro IPR008492; KEGG: amd:AMED_7844 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PAC2 family.
  
     0.434
ADU46743.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: nca:Noca_4497 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
  
     0.401
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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