STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47651.1KEGG: sro:Sros_3874 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF419). (126 aa)    
Predicted Functional Partners:
ADU50007.1
Putative transcriptional regulator, PucR family; COGs: COG2508 Regulator of polyketide synthase expression; KEGG: sen:SACE_5329 putative transcriptional regulator; SPTR: Putative transcriptional regulator.
  
     0.635
ADU49828.1
KEGG: nml:Namu_3002 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
ADU49560.1
KEGG: cai:Caci_0707 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.586
ADU47650.1
Sigma-70 region 4 type 2; InterPro IPR013249; KEGG: mav:MAV_0606 hypothetical protein; PFAM: Sigma-70 region 4 type 2; SPTR: Putative uncharacterized protein.
       0.506
ADU50101.1
KEGG: mab:MAB_3781 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.470
ADU47108.1
Peptidase M28; COGs: COG3227 Zinc metalloprotease (elastase); InterPro IPR011096: IPR013856: IPR001570: IPR007484; KEGG: sro:Sros_3786 zinc metalloprotease (elastase)-like protein; PFAM: peptidase M28; peptidase M4 thermolysin; Propeptide peptidase M4 and M36; Peptidase M4 thermolysin; SPTR: Zinc metalloprotease (Elastase)-like protein; manually curated; PFAM: Fungalysin/Thermolysin Propeptide Motif; Thermolysin metallopeptidase, alpha-helical domain; Peptidase family M28; Peptidase propeptide and YPEB domain; Thermolysin metallopeptidase, catalytic domain.
  
     0.458
ADU49459.1
KEGG: sro:Sros_7035 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.436
ADU50080.1
DNA alkylation repair enzyme; InterPro IPR014825; KEGG: amd:AMED_6049 putative DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; SPTR: Putative uncharacterized protein; PFAM: DNA alkylation repair enzyme.
 
     0.436
ADU49958.1
Hypothetical protein; InterPro IPR020311; KEGG: kfl:Kfla_3461 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2630).
  
     0.423
ADU46698.1
Carbamoyl-phosphate synthase L chain ATP-binding protein; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR005481: IPR005479: IPR005482: IPR000089: IPR 000022: IPR011761: IPR011764: IPR011763; KEGG: kfl:Kfla_3307 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; carboxyl transferase; SPTR: Carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Car [...]
  
     0.422
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.