STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47663.1Heparinase II/III family protein; InterPro IPR012480; KEGG: bcu:BCAH820_5363 hypothetical protein; PFAM: Heparinase II/III family protein; SPTR: Conserved domain protein; manually curated; PFAM: Heparinase II/III-like protein. (683 aa)    
Predicted Functional Partners:
ADU47661.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cgt:cgR_0436 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family; PFAM: Glycosyl transferases group 1.
 
     0.908
ADU47662.1
KEGG: bfa:Bfae_27760 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.847
ADU49771.1
Glycosyl transferase family 2; COGs: COG4641 conserved hypothetical protein; InterPro IPR001173; KEGG: kse:Ksed_26830 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Uncharacterized conserved protein; PFAM: Glycosyl transferase family 2.
 
     0.532
ADU47655.1
Glycosyl transferase family 2; COGs: COG4641 conserved hypothetical protein; InterPro IPR001173; KEGG: bfa:Bfae_27770 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
 
     0.508
ADU47666.1
KEGG: bfa:Bfae_27760 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.406
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.