STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47665.1Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: msm:MSMEG_5398 ISMsm4, transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: ISMsm4, transposase; PFAM: Transposase. (474 aa)    
Predicted Functional Partners:
ADU47664.1
Hypothetical protein; KEGG: psb:Psyr_0077 helix-turn-helix, fis-type; SPTR: Helix-turn-helix, Fis-type.
       0.773
ADU46876.1
Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: rha:RHA1_ro00013 transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: Transposase; PFAM: Transposase.
  
     0.763
ADU47666.1
KEGG: bfa:Bfae_27760 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.757
ADU47390.1
Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_2820 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Putative transposase; PFAM: Integrase core domain.
 
    0.627
ADU47658.1
Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_2820 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Putative transposase; PFAM: Integrase core domain.
 
    0.627
ADU47667.1
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: bfa:Bfae_27970 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
       0.605
ADU47668.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: bfa:Bfae_27980 ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
       0.605
ADU47669.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfa:Bfae_27990 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.605
ADU47670.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfa:Bfae_28280 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.605
ADU49604.1
IstB transposition helper protein; COGs: COG1484 DNA replication protein; InterPro IPR003593: IPR002611; KEGG: mkm:Mkms_5620 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; SPTR: IstB domain protein ATP-binding protein; PFAM: IstB-like ATP binding protein.
 
     0.596
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.