STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47666.1KEGG: bfa:Bfae_27760 hypothetical protein; SPTR: Putative uncharacterized protein. (300 aa)    
Predicted Functional Partners:
ADU47670.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfa:Bfae_28280 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.896
ADU47669.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfa:Bfae_27990 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.849
ADU47668.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: bfa:Bfae_27980 ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
 
     0.776
ADU47655.1
Glycosyl transferase family 2; COGs: COG4641 conserved hypothetical protein; InterPro IPR001173; KEGG: bfa:Bfae_27770 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
  
     0.764
ADU47667.1
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: bfa:Bfae_27970 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
     0.760
ADU47664.1
Hypothetical protein; KEGG: psb:Psyr_0077 helix-turn-helix, fis-type; SPTR: Helix-turn-helix, Fis-type.
       0.757
ADU47665.1
Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: msm:MSMEG_5398 ISMsm4, transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: ISMsm4, transposase; PFAM: Transposase.
       0.757
ADU49771.1
Glycosyl transferase family 2; COGs: COG4641 conserved hypothetical protein; InterPro IPR001173; KEGG: kse:Ksed_26830 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Uncharacterized conserved protein; PFAM: Glycosyl transferase family 2.
 
     0.707
ADU47661.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cgt:cgR_0436 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family; PFAM: Glycosyl transferases group 1.
  
     0.675
ADU49767.1
InterPro IPR001173; KEGG: kse:Ksed_26800 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase; PFAM: Glycosyl transferase family 2.
  
     0.547
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.