Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADU47681.1KEGG: hau:Haur_3056 PGAP1 family protein; SPTR: Putative uncharacterized protein. (538 aa)    
Predicted Functional Partners:
ADU47680.1
COGs: COG4995 conserved hypothetical protein; KEGG: sro:Sros_3451 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.917
ADU47934.1
Hypothetical protein; KEGG: gob:Gobs_2142 40-residue YVTN family beta-propeller repeat protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083).
  
     0.520
ADU48785.1
KEGG: art:Arth_2689 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.489
ADU49163.1
KEGG: nca:Noca_4524 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BNR/Asp-box repeat.
  
     0.473
ADU47646.1
Hypothetical protein; KEGG: gob:Gobs_2142 40-residue YVTN family beta-propeller repeat protein; SPTR: 40-residue YVTN family beta-propeller repeat protein.
  
     0.440
ADU50040.1
CHAP domain containing protein; COGs: COG3942 Surface antigen; InterPro IPR007921; KEGG: ooe:OEOE_1430 cell wall hydrolase; PFAM: CHAP domain containing protein; SPTR: Cell wall-associated hydrolase with LysM domains; PFAM: CHAP domain.
  
     0.409
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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