STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47749.1COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: mlu:Mlut_10710 SufE protein probably involved in Fe-S center assembly; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism associated domain protein; PFAM: Fe-S metabolism associated domain. (151 aa)    
Predicted Functional Partners:
ADU47750.1
COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: ach:Achl_1659 rhodanese domain protein; PFAM: Rhodanese domain protein; PRIAM: Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain.
 
     0.954
ADU47751.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551: IPR015358; KEGG: kfl:Kfla_1417 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; SPTR: MerR-family transcriptional regulator; PFAM: MerR, DNA binding; MerR family regulatory protein.
       0.766
ADU48777.1
Aminotransferase class V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: sna:Snas_2195 aminotransferase class V; PFAM: aminotransferase class V; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V.
 
 
 0.604
ADU47754.1
KEGG: cfl:Cfla_1002 putative integral membrane protein; SPTR: Putative integral membrane protein.
 
     0.569
ADU48220.1
COGs: COG0520 Selenocysteine lyase; InterPro IPR000192: IPR010970; KEGG: nda:Ndas_2959 cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SPTR: Cysteine desulphurases, SufS; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.549
ADU48672.1
Cysteine desulfurase family protein; COGs: COG0520 Selenocysteine lyase; InterPro IPR011340: IPR000192; KEGG: gob:Gobs_4945 cysteine desulfurase family protein; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Putative aminotransferase; TIGRFAM: cysteine desulfurase family protein; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily.
  
 
 0.549
ADU48689.1
COGs: COG0520 Selenocysteine lyase; InterPro IPR020578: IPR000192; KEGG: kfl:Kfla_2985 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V.
  
 
 0.549
ADU49044.1
Aminotransferase class V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: tpr:Tpau_3637 aminotransferase class V; PFAM: aminotransferase class V; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V.
  
 
 0.549
ADU48219.1
Iron-regulated ABC transporter ATPase subunit SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003593: IPR003439: IPR010230; KEGG: bcv:Bcav_2337 FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
  
 
 0.511
ADU47752.1
COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090: IPR006089; KEGG: kse:Ksed_08210 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: FadE19; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
       0.506
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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