STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47758.1KEGG: car:cauri_0505 hypothetical protein; SPTR: Transcriptional repressor protein. (98 aa)    
Predicted Functional Partners:
ADU47759.1
COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917: IPR011619: IPR011642: IPR011640: IPR 003373: IPR006073; KEGG: cur:cur_1150 putative ferrous iron transport protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: ferrous iron transport protein B; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron trans [...]
       0.827
ADU47760.1
KEGG: car:cauri_0507 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: FeoA domain.
       0.773
ADU47757.1
COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR005543: IPR008271: IPR000719: IPR 020635: IPR002290; KEGG: bcv:Bcav_1908 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain.
       0.623
ADU47756.1
Protein of unknown function DUF885; COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: kse:Ksed_08300 hypothetical protein; PFAM: protein of unknown function DUF885; SPTR: Uncharacterized conserved protein; PFAM: Bacterial protein of unknown function (DUF885).
       0.481
ADU47761.1
KEGG: kra:Krad_3990 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.440
ADU47762.1
COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022: IPR011762: IPR011763: IPR000438; KEGG: kfl:Kfla_1439 carboxyl transferase; PFAM: carboxyl transferase; SPTR: Propionyl-CoA carboxylase complex B subunit; PFAM: Carboxyl transferase domain.
       0.440
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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