STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47774.1Acylneuraminate cytidylyltransferase; COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR003329; KEGG: tin:Tint_2653 N-acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: Acylneuraminate cytidylyltransferase; PFAM: Cytidylyltransferase. (248 aa)    
Predicted Functional Partners:
ADU47775.1
Oxidoreductase domain-containing protein; COGs: COG0673 dehydrogenase and related protein; KEGG: net:Neut_1547 oxidoreductase domain-containing protein; SPTR: Oxidoreductase domain protein.
 
  
 0.935
ADU47780.1
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR020004: IPR003331; KEGG: hna:Hneap_0630 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing.
 
  
 0.918
ADU47779.1
COGs: COG2089 Sialic acid synthase; InterPro IPR013132: IPR013974; KEGG: mag:amb0080 sialic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acetylneuraminate synthase; SPTR: Sialic acid synthase; PFAM: SAF domain; NeuB family.
 
  
 0.915
ADU47781.1
Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR000644: IPR005835; KEGG: mag:amb0085 nucleoside-diphosphate-sugar pyrophosphorylase; PFAM: Nucleotidyl transferase; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Nucleoside-diphosphate-sugar pyrophosphorylase; PFAM: Nucleotidyl transferase; CBS domain.
 
  
 0.915
ADU47773.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: nwi:Nwi_2393 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.
 
   0.893
ADU49145.1
COGs: COG2089 Sialic acid synthase; InterPro IPR006190: IPR020030: IPR013132: IPR013974; KEGG: sro:Sros_1204 N-acylneuraminate-9-phosphate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acetylneuraminate synthase; SPTR: N-acylneuraminate-9-phosphate synthase; TIGRFAM: pseudaminic acid synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase.
 
  
 0.852
ADU47782.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: dra:DR_0711 UDP-glucose 4-epimerase, putative; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase, putative; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.845
ADU47776.1
Polysaccharide biosynthesis protein; InterPro IPR000812: IPR002797; KEGG: cwo:Cwoe_0093 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
 
   
 0.674
ADU47778.1
Transferase hexapeptide repeat containing protein; COGs: COG1045 Serine acetyltransferase; InterPro IPR018357: IPR001451; KEGG: gur:Gura_1700 serine acetyltransferase-like protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: Pilin glycosylation protein; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
   
 0.656
ADU47777.1
Hypothetical protein; KEGG: tmt:Tmath_0720 capsule polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Capsule polysaccharide biosynthesis protein.
 
   
 0.604
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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