STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47785.1KEGG: kse:Ksed_01640 hypothetical protein; SPTR: Putative uncharacterized protein. (265 aa)    
Predicted Functional Partners:
ADU49002.1
SAF domain protein; InterPro IPR013974; KEGG: cfl:Cfla_2320 hypothetical protein; PFAM: SAF domain protein; SPTR: Putative uncharacterized protein.
  
     0.719
ADU47810.1
KEGG: kra:Krad_3784 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.705
ADU49004.1
KEGG: gob:Gobs_4274 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.651
ADU47952.1
Peptidoglycan-binding lysin domain; InterPro IPR018392; KEGG: kse:Ksed_17220 LysM domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
  
     0.641
ADU47809.1
KEGG: kra:Krad_3785 TadE family protein; SPTR: Putative uncharacterized protein.
  
     0.634
ADU49005.1
InterPro IPR018392; KEGG: cfl:Cfla_2323 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
  
     0.598
ADU47805.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: xce:Xcel_1032 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
  
     0.580
ADU49012.1
Lipoprotein LpqB, GerMN domain; InterPro IPR019606: IPR018910; KEGG: kse:Ksed_08610 lipoprotein LpqB family protein/sporulation and spore germination protein; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, beta-propeller domain-like; SPTR: Lipoprotein LpqB family protein/sporulation and spore germination protein; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
  
     0.580
ADU48715.1
KEGG: kse:Ksed_09220 rod shape-determining protein MreD; SPTR: Rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.568
ADU49062.1
COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR002575; KEGG: kra:Krad_1175 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Macrolide 2'-phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.565
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.