STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47807.1KEGG: kse:Ksed_10350 hypothetical protein; SPTR: Putative uncharacterized protein. (75 aa)    
Predicted Functional Partners:
ADU47805.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: xce:Xcel_1032 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
 
     0.932
ADU47806.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: kse:Ksed_10340 Flp pilus assembly protein TadB; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
 
     0.922
ADU47809.1
KEGG: kra:Krad_3785 TadE family protein; SPTR: Putative uncharacterized protein.
 
     0.922
ADU47808.1
KEGG: bcv:Bcav_2787 TadE family protein; SPTR: Putative uncharacterized protein; PFAM: TadE-like protein.
 
     0.915
ADU47810.1
KEGG: kra:Krad_3784 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.814
ADU47804.1
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: fre:Franean1_5826 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: Putative type II/type IV pathway secretion protein; PFAM: Type II/IV secretion system protein.
 
     0.786
ADU49002.1
SAF domain protein; InterPro IPR013974; KEGG: cfl:Cfla_2320 hypothetical protein; PFAM: SAF domain protein; SPTR: Putative uncharacterized protein.
  
     0.754
ADU49001.1
Hypothetical protein; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: gob:Gobs_4271 hypothetical protein; SPTR: Putative regulator; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
     0.742
ADU49004.1
KEGG: gob:Gobs_4274 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.716
ADU49003.1
InterPro IPR010093; KEGG: kfl:Kfla_1648 DNA binding domain protein, excisionase family; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
  
     0.703
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.