Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADU47852.1COGs: COG2339 membrane protein; KEGG: kse:Ksed_08850 predicted membrane protein; SPTR: Putative membrane protein. (364 aa)    
Predicted Functional Partners:
orn
Exonuclease RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.
       0.627
ADU47853.1
KEGG: kse:Ksed_08870 hypothetical protein; SPTR: Putative ABC transporter; PFAM: Dynamin family.
 
     0.544
ADU47854.1
GTPase; KEGG: kse:Ksed_08880 predicted GTPase; SPTR: Putative ABC transporter; PFAM: Dynamin family.
 
     0.469
ADU48326.1
Hypothetical protein; InterPro IPR016602; KEGG: nml:Namu_1357 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.434
ADU46592.1
KEGG: sen:SACE_1595 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.417
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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