STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47854.1GTPase; KEGG: kse:Ksed_08880 predicted GTPase; SPTR: Putative ABC transporter; PFAM: Dynamin family. (576 aa)    
Predicted Functional Partners:
ADU47853.1
KEGG: kse:Ksed_08870 hypothetical protein; SPTR: Putative ABC transporter; PFAM: Dynamin family.
 
    
0.878
ADU47855.1
COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344: IPR000424; KEGG: fra:Francci3_1145 single-stranded DNA-binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
       0.537
ADU47852.1
COGs: COG2339 membrane protein; KEGG: kse:Ksed_08850 predicted membrane protein; SPTR: Putative membrane protein.
 
     0.469
ADU46731.1
KEGG: tcu:Tcur_0118 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.443
ADU48665.1
KEGG: xce:Xcel_2206 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PemK-like protein.
  
     0.421
ADU46962.1
KEGG: kse:Ksed_25980 hypothetical protein; SPTR: Putative membrane protein.
  
     0.420
ADU47538.1
KEGG: krh:KRH_06700 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.415
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.