STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47895.1Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: kfl:Kfla_1428 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58. (437 aa)    
Predicted Functional Partners:
ADU47898.1
KEGG: nca:Noca_1476 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.959
ADU47896.1
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR016366: IPR011703; KEGG: nca:Noca_1478 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase associated with various cellular activities, AAA_3; PFAM: ATPase family associated with various cellular activities (AAA).
 
  
 0.860
ADU47894.1
KEGG: nca:Noca_1480 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.788
ADU47897.1
KEGG: saq:Sare_0844 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.788
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner.
       0.511
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.486
ADU49099.1
KEGG: ssl:SS1G_03268 hypothetical protein; SPTR: Predicted protein.
  
     0.484
purD
COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR011761: IPR011764: IPR000115: IPR020562: IPR 020561: IPR020560; KEGG: xce:Xcel_3134 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Putative phosphoribosylglycinamide synthetase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) d [...]
      
 0.463
ADU47831.1
RDD domain containing protein; InterPro IPR018929: IPR010432; KEGG: kra:Krad_3769 RDD domain containing protein; PFAM: RDD domain containing protein; Protein of unknown function DUF2510; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2510); RDD family.
 
    0.457
ADU49232.1
KEGG: sma:SAV_48 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.446
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.