STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47952.1Peptidoglycan-binding lysin domain; InterPro IPR018392; KEGG: kse:Ksed_17220 LysM domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; PFAM: LysM domain. (122 aa)    
Predicted Functional Partners:
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
ADU48243.1
KEGG: kse:Ksed_13550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.754
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
ADU47871.1
KEGG: kse:Ksed_08960 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
ADU48488.1
KEGG: fre:Franean1_1818 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.732
lexA
SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
  
  
 0.680
ADU48546.1
KEGG: kse:Ksed_12170 hypothetical protein; SPTR: Methionine aminopeptidase.
  
     0.662
ADU47020.1
KEGG: nca:Noca_0019 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.653
ADU49709.1
KEGG: nca:Noca_0019 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.653
ADU47785.1
KEGG: kse:Ksed_01640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.641
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.