STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47978.1FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR013027: IPR001327; KEGG: rha:RHA1_ro04494 potassium uptake protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Possible potassium uptake protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (375 aa)    
Predicted Functional Partners:
ADU47977.1
KEGG: bcv:Bcav_0070 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.794
ADU47979.1
Transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: mjl:Mjls_0414 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.
 
     0.782
ADU47976.1
Transcriptional regulator, LuxR family; COGs: COG3899 ATPase; InterPro IPR000792: IPR019734; KEGG: sti:Sthe_2247 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; Tetratricopeptide repeat; SPTR: Transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.
       0.487
ADU47974.1
KEGG: sus:Acid_3612 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.477
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.418
ADU47144.1
Protein of unknown function DUF1028; COGs: COG3342 conserved hypothetical protein; InterPro IPR010430: IPR014927; KEGG: kse:Ksed_04410 hypothetical protein; PFAM: protein of unknown function DUF1028; Putative peptidoglycan binding; SPTR: Uncharacterized conserved protein; PFAM: Putative peptidoglycan binding domain; Family of unknown function (DUF1028).
 
     0.416
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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