STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU47981.1Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR017039: IPR004664; KEGG: rop:ROP_32170 putative ribonuclease; PFAM: ribonuclease BN; SPTR: Putative ribonuclease; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN). (355 aa)    
Predicted Functional Partners:
ADU50028.1
KEGG: art:Arth_0347 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1469).
 
     0.675
ADU47982.1
COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: ske:Sked_15540 predicted oxidoreductase, aryl-alcohol dehydrogenase like protein; PFAM: aldo/keto reductase; SPTR: K+ channel beta subunit; PFAM: Aldo/keto reductase family.
  
    0.630
ADU50029.1
KEGG: pfr:PFREUD_00910 hypothetical membrane protein; SPTR: Hypothetical membrane protein; PFAM: Protein of unknown function (DUF3618).
 
     0.542
ADU47983.1
UspA domain-containing protein; InterPro IPR006015: IPR006016; KEGG: sna:Snas_3659 UspA domain-containing protein; PFAM: UspA domain-containing protein; SPTR: UspA domain protein; PFAM: Universal stress protein family.
  
  
 0.516
ADU50027.1
KEGG: aau:AAur_0122 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.506
ADU47980.1
InterPro IPR018357: IPR001451; KEGG: cfl:Cfla_0787 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein.
  
    0.496
ADU47012.1
Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: amd:AMED_4111 hypothetical protein; PFAM: phospholipase D/Transphosphatidylase; SPTR: Phospholipase D; PFAM: Phospholipase D Active site motif.
 
    0.491
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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